The phylum Chordata is divided into protochordates (urochordates and cephalochordates) and vertebrates (cyclostomes, fish, amphibians, reptiles, birds and mammals).
All organisms of the phylum Chordata have branchial clefts in the pharynx (in some species present only in the embryo), a notochord (substituted by the spine in vertebrates) and a dorsal neural tube.
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In humans, the branchial clefts located in the anterior region of the pharynx (also known as pharyngeal clefts) are present only during the embryonic stage and disappear later.
In vertebrates, the notochord disappears and to produce the spine (vertebral column). In protochordates, the notochord remains during their whole life.
The tubular and dorsal nervous system of chordates is related to the cephalization in these animals and to bilateral symmetry.
The presence of neural integrating centers with a concentration of neurons in the brain and the spinal cord (central nervous system, CNS) permitted the increase in the complexity of the interaction between these animals and their environment. Receptor (afferent conduction) and efferent (motor, regulatory and behavioral reactions) functions are more sophisticated in chordates due to the presence of more better-developed neural networks. These features have been preserved by evolution, as they provide an adaptive advantage to the species in which they are present.
In chordates, the nervous system is dorsal and highly cephalized. In most invertebrates, the nervous system is ganglial and ventral.
Amphibians, partially aquatic and partially terrestrial animals, were the first chordates to live on dry land. They originated from an aquatic habitat and are a descendant of fish. (Nevertheless, the first completely terrestrial chordates were reptiles).
Reproduction in organisms of the phylum Chordata is sexual, with the exception of urochordates, which can also reproduce asexually. Some classes (cyclostomes, osteichthyes fish and amphibians) have a larval stage. With rare exceptions, fish, amphibians, reptiles and monotreme mammals are oviparous; egg-laying (embryos develop within eggs and outside the mother’s body), marsupial and placental mammals are viviparous (embryos develop inside the mother’s body, feeding from her).
Urochordates (or tunicates) and cephalochordates are the two subphyla into which protochordates are divided.
Ascidians, sessile animals similar to sponges, are examples of tunicates. The amphioxus, well-studied in Embryology, is an example of a cephalochordate.
The differences with respect to each of the six following criteria determine the evolutionary branch of vertebrates: the absence of mandibles separates cyclostomes from the others; the absence of limbs separates fish from the remainder; the absence of an osseous skeleton separates chondrichthyan (cartilaginous) fish from osteichthyes; the absence of waterproof skin separates amphibians from terrestrial vertebrates; the absence of warm blood (a homeothermic body) separates reptiles from birds and mammals; and the absence of mammary glands and hair separates birds from mammals.
Hypothesis to be tested: Vertebrates evolved from echinoderms. Testing material: A newly found protochordate species (more specifically, a vertebrate precursor).
Example that would weaken the hypothesis (making the new protochordate species evolutionarily distant from echinoderms): discovering that the new species is protostome, as opposed to echinoderms, which are deuterostomes. This observation raises the possibility that deuterostomy in vertebrates is independent in origin from that of echinoderms.
Example that would strengthen the hypothesis (making the new protochordate species evolutionarily closer to echinoderms): discovering that the new species has secondary radial symmetry, which is similar to echinoderms. This observation strengthens the hypothesis that echinoderms and vertebrates are relatives.
(This section shows how science works, beginning with the establishment of a hypothesis and continuing with further observational testing.)
Examples of representing species: protochordates (ascidians, amphioxus), vertebrates. Basic morphology: branchial clefts, a notochord, a neural tube. Type of symmetry: bilateral. Germ layers and coelom: triploblastic, coelomates. Digestive system: complete, deuterostomes. Respiratory system: branchial (in aquatic chordates), cutaneous (in adult amphibians), pulmonary (others). Circulatory system: open in protochordates, closed in vertebrates. Excretory system: diffusion and flame cells in protochordates, kidneys in vertebrates. Nervous system: neural tube in embryos, cerebral vesicle and single ganglion in protochordates, brain within the cranium and spinal cord within the spine in vertebrates. Types of reproduction: sexual, with or without a larval stage.
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